STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
elavl2ELAV-like protein; Belongs to the RRM elav family. (391 aa)    
Predicted Functional Partners:
LOC106607370
DNA-3-methyladenine glycosylase-like isoform X1.
      
 0.624
LOC106601084
DNA-3-methyladenine glycosylase-like isoform X1.
      
 0.624
LOC106570531
Transformer-2 protein homolog alpha-like.
  
 0.594
LOC106607090
RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.
  
 
 0.594
LOC106575368
Transformer-2 protein homolog beta-like.
  
 0.578
tra2b
Splicing factor, arginine/serine-rich 10.
  
 0.576
LOC106606043
RNA-binding protein 24-B-like.
  
 
 
 0.562
ENSSSAP00000021569
annotation not available
  
 
 
 0.562
ENSSSAP00000022354
annotation not available
  
 
 
 0.562
ENSSSAP00000061457
annotation not available
  
 
 
 0.562
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.