STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000005267annotation not available (146 aa)    
Predicted Functional Partners:
sympk
Symplekin.
    
 
 0.929
LOC106566187
Translation machinery-associated protein 7.
   
    0.628
LOC106583717
Translation machinery-associated protein 7-like.
   
    0.628
LOC106568989
Transcription initiation factor IIB-like.
   
 
 0.599
tf2b
Transcription initiation factor IIB.
   
 
 0.599
ENSSSAP00000057692
SPT5 homolog, DSIF elongation factor subunit.
    
 
 0.494
LOC106580766
Transcription elongation factor SPT5.
    
 
 0.494
ENSSSAP00000003559
annotation not available
   
  
 0.482
POMP
Proteasome maturation protein.
   
  
 0.482
LOC106590604
Proteasome maturation protein-like isoform X1.
   
  
 0.482
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.