rbpms protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Coexpression

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[Homology]

Score

rbpms

RNA-binding protein with multiple splicing. (193 aa)

Predicted Functional Partners:

LOC106610670

0.790

LOC106561796

0.790

LOC106605787

0.790

qki

0.790

LOC106578914

0.790

ENSSSAP00000115919

0.790

LOC106589218

0.699

LOC106607090

0.699

LOC106607100

0.699

LOC106601175

0.699

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000115919	LOC106589218	ENSSSAP00000115919	ENSSSAP00000014444	Protein quaking-A-like.	RNA binding protein fox-1 homolog 2-like isoform X4.	0.501
ENSSSAP00000115919	LOC106601175	ENSSSAP00000115919	ENSSSAP00000115755	Protein quaking-A-like.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.501
ENSSSAP00000115919	LOC106607090	ENSSSAP00000115919	ENSSSAP00000066540	Protein quaking-A-like.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.501
ENSSSAP00000115919	LOC106607100	ENSSSAP00000115919	ENSSSAP00000066819	Protein quaking-A-like.	RNA binding protein fox-1 homolog 2-like isoform X1.	0.501
ENSSSAP00000115919	rbpms	ENSSSAP00000115919	ENSSSAP00000005300	Protein quaking-A-like.	RNA-binding protein with multiple splicing.	0.790
LOC106561796	LOC106589218	ENSSSAP00000017969	ENSSSAP00000014444	Protein quaking-A isoform X1.	RNA binding protein fox-1 homolog 2-like isoform X4.	0.501
LOC106561796	LOC106601175	ENSSSAP00000017969	ENSSSAP00000115755	Protein quaking-A isoform X1.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.501
LOC106561796	LOC106607090	ENSSSAP00000017969	ENSSSAP00000066540	Protein quaking-A isoform X1.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.501
LOC106561796	LOC106607100	ENSSSAP00000017969	ENSSSAP00000066819	Protein quaking-A isoform X1.	RNA binding protein fox-1 homolog 2-like isoform X1.	0.501
LOC106561796	rbpms	ENSSSAP00000017969	ENSSSAP00000005300	Protein quaking-A isoform X1.	RNA-binding protein with multiple splicing.	0.790
LOC106578914	LOC106589218	ENSSSAP00000075040	ENSSSAP00000014444	Protein quaking-A-like isoform X2.	RNA binding protein fox-1 homolog 2-like isoform X4.	0.501
LOC106578914	LOC106601175	ENSSSAP00000075040	ENSSSAP00000115755	Protein quaking-A-like isoform X2.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.501
LOC106578914	LOC106607090	ENSSSAP00000075040	ENSSSAP00000066540	Protein quaking-A-like isoform X2.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.501
LOC106578914	LOC106607100	ENSSSAP00000075040	ENSSSAP00000066819	Protein quaking-A-like isoform X2.	RNA binding protein fox-1 homolog 2-like isoform X1.	0.501
LOC106578914	rbpms	ENSSSAP00000075040	ENSSSAP00000005300	Protein quaking-A-like isoform X2.	RNA-binding protein with multiple splicing.	0.790
LOC106589218	ENSSSAP00000115919	ENSSSAP00000014444	ENSSSAP00000115919	RNA binding protein fox-1 homolog 2-like isoform X4.	Protein quaking-A-like.	0.501
LOC106589218	LOC106561796	ENSSSAP00000014444	ENSSSAP00000017969	RNA binding protein fox-1 homolog 2-like isoform X4.	Protein quaking-A isoform X1.	0.501
LOC106589218	LOC106578914	ENSSSAP00000014444	ENSSSAP00000075040	RNA binding protein fox-1 homolog 2-like isoform X4.	Protein quaking-A-like isoform X2.	0.501
LOC106589218	LOC106605787	ENSSSAP00000014444	ENSSSAP00000060502	RNA binding protein fox-1 homolog 2-like isoform X4.	Protein quaking-B-like isoform X1.	0.501
LOC106589218	LOC106610670	ENSSSAP00000014444	ENSSSAP00000004710	RNA binding protein fox-1 homolog 2-like isoform X4.	Parkin coregulated gene protein homolog.	0.501