STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601247Desumoylating isopeptidase 1-like. (168 aa)    
Predicted Functional Partners:
PSD8
26S proteasome non-ATPase regulatory subunit 8.
    
   0.908
psma5
Proteasome subunit alpha type.
    
   0.908
PSMD12
26S proteasome non-ATPase regulatory subunit 12-like.
   
   0.894
psd12
26S proteasome non-ATPase regulatory subunit 12.
   
   0.894
prs6a
26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.
   
   0.892
LOC106605234
26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.
   
   0.892
prs8
26S protease regulatory subunit 8.
   
   0.892
prs6b
26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.
   
   0.892
LOC106579096
26S protease regulatory subunit 8; Belongs to the AAA ATPase family.
   
   0.892
LOC106561966
26S protease regulatory subunit 6A-B-like isoform X1; Belongs to the AAA ATPase family.
   
   0.892
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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