STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000005437annotation not available (210 aa)    
Predicted Functional Partners:
LOC106601650
Tumor necrosis factor receptor superfamily member 16-like.
    
 0.944
LOC106567263
Cell division control protein 42 homolog isoform X2.
   
 0.833
LOC106565619
Cell division control protein 42 homolog isoform X1.
   
 0.833
LOC106572399
Cell division control protein 42 homolog isoform X1.
   
 0.833
LOC106583122
Cell division control protein 42 homolog isoform X1.
   
 0.833
LOC106572042
Transforming protein RhoA-like isoform X1.
   
 0.809
LOC106607565
Rho-related GTP-binding protein RhoB-like.
   
 0.809
ENSSSAP00000049335
annotation not available
   
 0.809
LOC106566835
Transforming protein RhoA-like.
   
 0.809
LOC106582735
Rho-related GTP-binding protein RhoC.
   
 0.809
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.