STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtMetallothionein; Metallothioneins have a high content of cysteine residues that bind various heavy metals. (59 aa)    
Predicted Functional Partners:
sod1
Superoxide dismutase, Cu-Zn family.
    
 
 0.550
SOD1
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
 
 0.516
GPX4
Phospholipid hydroperoxide glutathione peroxidase, mitochondrial-like isoform X1.
   
  
 0.498
swi5
DNA repair protein SWI5 homolog; Component of the swi5-sfr1 complex, a complex required for double-strand break repair via homologous recombination.
      
 0.497
LOC100194734
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
  
 0.456
gpx8
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
  
 0.453
LOC106570901
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
  
 0.446
GPX2
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
  
 0.437
LOC106566059
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
  
 0.434
sod3
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
 
 0.428
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.