STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pigoGPI ethanolamine phosphate transferase 3. (1123 aa)    
Predicted Functional Partners:
pigf
Phosphatidylinositol-glycan biosynthesis class F protein isoform X1.
    
 0.988
pigf-2
Phosphatidylinositol glycan anchor biosynthesis class F.
    
 0.988
pigu
Phosphatidylinositol glycan anchor biosynthesis class U protein.
   
 0.966
LOC106594017
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 0.962
LOC106567380
GPI transamidase component PIG-T-like isoform X1.
    
 0.958
pigb
Mannosyltransferase.
    
 0.958
pigg
GPI ethanolamine phosphate transferase 2 isoform X1.
   
 
0.666
ENSSSAP00000023771
annotation not available
   
 
0.666
ENSSSAP00000005462
Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q-like.
   
 
 0.644
pigq
Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q.
   
 
 0.644
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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