STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601577Uncharacterized protein LOC106601577 isoform X1. (2246 aa)    
Predicted Functional Partners:
camkmt
Calmodulin-lysine N-methyltransferase.
     
 0.668
LOC106612584
E3 ubiquitin-protein ligase TRIP12-like isoform X1.
   
  
 0.548
LOC106580884
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
  
 0.548
cct7
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
      
 0.511
LOC106611696
FERM and PDZ domain-containing protein 1-like isoform X2.
  
     0.471
LOC106603477
Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific-like isoform X1.
  
   
 0.444
LOC106562517
Tumor suppressor p53-binding protein 1-like isoform X3.
    
 
 0.436
ENSSSAP00000059858
annotation not available
    
 
 0.436
LOC106568016
Histone-lysine N-methyltransferase NSD3-like isoform X2.
  
   
 0.430
frmpd1
FERM and PDZ domain-containing protein 1 isoform X2.
  
     0.403
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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