ENSSSAP00000005554 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSSAP00000005554

annotation not available (189 aa)

Predicted Functional Partners:

LOC106593828

0.663

stard3nl

0.595

LOC106561700

0.581

ENSSSAP00000079429

0.581

LOC106609191

0.581

bcap31

0.581

bcap29

0.581

spats1

0.577

LOC106600847

0.575

LOC106607479

0.575

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000005554	ENSSSAP00000079429	ENSSSAP00000005554	ENSSSAP00000079429	annotation not available	Dihydrouridine synthase 4-like (S. cerevisiae).	0.581
ENSSSAP00000005554	LOC106561700	ENSSSAP00000005554	ENSSSAP00000043716	annotation not available	B-cell receptor-associated protein 29-like.	0.581
ENSSSAP00000005554	LOC106593828	ENSSSAP00000005554	ENSSSAP00000004428	annotation not available	Translocation protein SEC63 homolog isoform X2.	0.663
ENSSSAP00000005554	LOC106600847	ENSSSAP00000005554	ENSSSAP00000008389	annotation not available	Oxysterol-binding protein; Belongs to the OSBP family.	0.575
ENSSSAP00000005554	LOC106607479	ENSSSAP00000005554	ENSSSAP00000012766	annotation not available	Oxysterol-binding protein; Belongs to the OSBP family.	0.575
ENSSSAP00000005554	LOC106609191	ENSSSAP00000005554	ENSSSAP00000079449	annotation not available	B-cell receptor-associated protein 29-like.	0.581
ENSSSAP00000005554	bcap29	ENSSSAP00000005554	ENSSSAP00000099834	annotation not available	B-cell receptor-associated protein 29 isoform X2.	0.581
ENSSSAP00000005554	bcap31	ENSSSAP00000005554	ENSSSAP00000098823	annotation not available	B-cell receptor-associated protein 31.	0.581
ENSSSAP00000005554	spats1	ENSSSAP00000005554	ENSSSAP00000040714	annotation not available	Spermatogenesis-associated serine-rich protein 1.	0.577
ENSSSAP00000005554	stard3nl	ENSSSAP00000005554	ENSSSAP00000043573	annotation not available	MLN64 N-terminal domain homolog.	0.595
ENSSSAP00000079429	ENSSSAP00000005554	ENSSSAP00000079429	ENSSSAP00000005554	Dihydrouridine synthase 4-like (S. cerevisiae).	annotation not available	0.581
ENSSSAP00000079429	LOC106593828	ENSSSAP00000079429	ENSSSAP00000004428	Dihydrouridine synthase 4-like (S. cerevisiae).	Translocation protein SEC63 homolog isoform X2.	0.675
LOC106561700	ENSSSAP00000005554	ENSSSAP00000043716	ENSSSAP00000005554	B-cell receptor-associated protein 29-like.	annotation not available	0.581
LOC106561700	LOC106593828	ENSSSAP00000043716	ENSSSAP00000004428	B-cell receptor-associated protein 29-like.	Translocation protein SEC63 homolog isoform X2.	0.675
LOC106593828	ENSSSAP00000005554	ENSSSAP00000004428	ENSSSAP00000005554	Translocation protein SEC63 homolog isoform X2.	annotation not available	0.663
LOC106593828	ENSSSAP00000079429	ENSSSAP00000004428	ENSSSAP00000079429	Translocation protein SEC63 homolog isoform X2.	Dihydrouridine synthase 4-like (S. cerevisiae).	0.675
LOC106593828	LOC106561700	ENSSSAP00000004428	ENSSSAP00000043716	Translocation protein SEC63 homolog isoform X2.	B-cell receptor-associated protein 29-like.	0.675
LOC106593828	LOC106609191	ENSSSAP00000004428	ENSSSAP00000079449	Translocation protein SEC63 homolog isoform X2.	B-cell receptor-associated protein 29-like.	0.675
LOC106593828	bcap29	ENSSSAP00000004428	ENSSSAP00000099834	Translocation protein SEC63 homolog isoform X2.	B-cell receptor-associated protein 29 isoform X2.	0.675
LOC106593828	bcap31	ENSSSAP00000004428	ENSSSAP00000098823	Translocation protein SEC63 homolog isoform X2.	B-cell receptor-associated protein 31.	0.675