STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608520Period circadian protein homolog 1-like isoform X1. (1403 aa)    
Predicted Functional Partners:
timeless
Protein timeless homolog.
   
 0.950
ENSSSAP00000119576
Cryptochrome circadian regulator 4.
   
 0.909
LOC106568206
Cryptochrome-1-like isoform X1.
   
 0.896
LOC106583488
Cryptochrome-1-like isoform X1.
   
 0.889
LOC106609470
Casein kinase I isoform epsilon-like; Belongs to the protein kinase superfamily.
    
 0.880
LOC106589542
Casein kinase I isoform epsilon-like; Belongs to the protein kinase superfamily.
    
 0.880
csnk1d
Casein kinase I isoform delta isoform X2; Belongs to the protein kinase superfamily.
    
 0.880
LOC106573292
Cryptochrome-1-like.
   
 0.878
LOC106561607
C-Jun-amino-terminal kinase-interacting protein 1-like.
   
 0.860
cry1
Cryptochrome-1.
   
 0.857
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.