STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106606146Protein Jumonji-like. (128 aa)    
Predicted Functional Partners:
LOC106573015
Zinc finger protein aebp2-like.
    
 0.958
LOC106561744
Zinc finger protein aebp2-like isoform X1.
    
 0.958
LOC106609187
Zinc finger protein AEBP2-like isoform X2.
    
 0.958
LOC106575772
Polycomb protein eed.
   
 0.956
LOC106587302
Polycomb protein suz12-B-like.
    
 0.956
LOC106606530
Polycomb protein eed-like isoform X1.
   
 0.956
eed
Polycomb protein EED.
   
 0.956
LOC106601962
Polycomb protein suz12-A-like.
    
 0.956
LOC106564652
Polycomb protein suz12-B-like isoform X1.
    
 0.956
ATP6
ATP synthase subunit a; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subuni [...]
  
 0.955
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.