STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106585043TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (566 aa)    
Predicted Functional Partners:
LOC106562229
Tumor necrosis factor receptor type 1-associated DEATH domain protein-like.
    
 0.982
LOC106587422
Tumor necrosis factor receptor type 1-associated DEATH domain protein.
    
 0.982
ENSSSAP00000084846
annotation not available
   
 0.950
tank
LOW QUALITY PROTEIN: TRAF family member-associated NF-kappa-B activator.
    
 0.917
LOC106586184
TRAF family member-associated NF-kappa-B activator-like isoform X1.
    
 0.910
LOC106604062
Inhibitor of apoptosis protein-like isoform X1.
   
 0.898
TBK1
Serine/threonine-protein kinase TBK1.
   
 0.879
LOC106612162
Baculoviral IAP repeat-containing protein 4.
   
 0.871
LOC106604301
E3 ubiquitin-protein ligase XIAP-like isoform X1.
   
 0.871
LOC106592035
TNF receptor-associated factor 6-like.
   
0.867
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.