STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106565196Protein phosphatase 1 regulatory subunit 3C-B-like. (306 aa)    
Predicted Functional Partners:
gys1
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.909
GYS2
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.909
LOC106601986
Glycogen [starch] synthase, muscle-like.
   
 0.753
phkg2
Phosphorylase b kinase gamma catalytic chain, liver/testis isoform isoform X1; Belongs to the protein kinase superfamily.
     
 0.667
PHKG1
Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform-like; Belongs to the protein kinase superfamily.
     
 0.667
LOC106597678
Calmodulin-like protein 4.
     
  0.650
calm2-4
Calmodulin 2 (Phosphorylase kinase, delta)-1; Belongs to the calmodulin family.
     
  0.650
call4
Calmodulin-like protein 4.
     
  0.650
phkb
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.
     
  0.650
LOC106587291
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.
     
  0.650
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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