STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106606149dysbindin-A-like isoform X1. (138 aa)    
Predicted Functional Partners:
LOC106566155
Biogenesis of lysosome-related organelles complex 1 subunit 1.
     
 0.723
bloc1s1
Lysosome-related ORGANELLE complex-1 subunit 1.
     
 0.723
ENSSSAP00000035499
annotation not available
    
 0.676
ENSSSAP00000087359
annotation not available
    
 0.676
LOC106562462
Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. May play a role in intracellular vesicle trafficking, particular [...]
    
 0.676
LOC106612721
Biogenesis of lysosome-related organelles complex 1 subunit 3-like.
     
 0.628
ENSSSAP00000025706
annotation not available
     
 0.628
ENSSSAP00000042354
annotation not available
     
 0.628
snapin
SNARE-associated protein Snapin.
     
 0.561
LOC106569889
SNARE-associated protein Snapin-like isoform X1.
     
 0.561
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.