STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609895Transmembrane protein 109-like. (220 aa)    
Predicted Functional Partners:
ENSSSAP00000055248
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial-like.
    
 0.847
gatb
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
    
 0.847
l3hypdh
trans-3-hydroxy-L-proline dehydratase isoform X1.
    
 0.825
iah1
Isoamyl acetate-hydrolyzing esterase 1 homolog.
    
 0.811
LOC106613353
GMP synthase [glutamine-hydrolyzing]-like.
  
 
  0.776
LOC106581456
GMP synthase [glutamine-hydrolyzing].
  
 
  0.776
LOC106560282
Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
  0.734
ppat
Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
  0.734
asnsd1
Asparagine synthetase domain-containing protein 1 isoform X1.
     
 0.681
LOC106588679
Actin-binding protein anillin-like isoform X2.
     
 0.681
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.