STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106593532Guanine nucleotide-binding protein subunit alpha-12-like. (157 aa)    
Predicted Functional Partners:
arhgef1
Rho guanine nucleotide exchange factor 1 isoform X3.
    
 0.971
LOC106609016
Rho guanine nucleotide exchange factor 11-like isoform X3.
    
 0.971
LOC106577853
Rho guanine nucleotide exchange factor 11-like isoform X1.
    
 0.971
F2R
Proteinase-activated receptor 1-like.
    
 0.936
F2R-2
Proteinase-activated receptor 1.
    
 0.936
LOC106610223
Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.
    
 0.932
LOC106600212
C-X-C chemokine receptor type 4-like isoform X2; Belongs to the G-protein coupled receptor 1 family.
    
 0.927
LOC106569491
C-X-C chemokine receptor type 4-like; Belongs to the G-protein coupled receptor 1 family.
    
 0.927
CXCR4
C-X-C chemokine receptor type 4-like; Belongs to the G-protein coupled receptor 1 family.
    
 0.927
cxcr4
C-X-C chemokine receptor type 4; Belongs to the G-protein coupled receptor 1 family.
    
 0.927
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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