STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10661349739S ribosomal protein L47, mitochondrial-like. (258 aa)    
Predicted Functional Partners:
ENSSSAP00000051367
annotation not available
   
 
 0.996
mrpl22
39S ribosomal protein L22, mitochondrial isoform X1; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.993
mrpl19
39S ribosomal protein L19, mitochondrial.
   
 
 0.993
mrpl46
39S ribosomal protein L46, mitochondrial.
   
 
 0.991
mrps10
28S ribosomal protein S10, mitochondrial.
   
 
 0.990
LOC106606250
39S ribosomal protein L12, mitochondrial-like isoform X1.
   
 
 0.988
LOC106605701
39S ribosomal protein L17, mitochondrial-like isoform X1; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.987
mrpl17
Salmo salar ribosomal protein L17 mitochondrial-like protein (mrpl17), mRNA.
   
 
 0.987
mrpl40
39S ribosomal protein L40, mitochondrial isoform X1.
   
 
 0.986
mrpl3
39S ribosomal protein L3, mitochondrial; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.985
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (12%) [HD]