STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106605594Zinc finger protein 628-like. (1425 aa)    
Predicted Functional Partners:
LOC106610962
Transcription factor IIIB 90 kDa subunit-like.
   
 
 0.440
LOC106571710
Transcription factor IIIB 90 kDa subunit-like.
   
 
 0.440
LOC106604053
Importin subunit alpha; Belongs to the importin alpha family.
    
 0.426
ima2
Importin subunit alpha; Belongs to the importin alpha family.
    
 0.426
ima5
Importin subunit alpha; Belongs to the importin alpha family.
    
 0.426
LOC106589075
Importin subunit alpha; Belongs to the importin alpha family.
    
 0.426
LOC106605526
Importin subunit alpha; Belongs to the importin alpha family.
    
 0.426
LOC106580964
Importin subunit alpha; Belongs to the importin alpha family.
    
 0.426
LOC106575551
Importin subunit alpha; Belongs to the importin alpha family.
    
 0.426
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.