STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acl6bActin-like protein 6B isoform X1; Belongs to the actin family. (434 aa)    
Predicted Functional Partners:
actr8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize (By similarity); Belongs to the actin family. ARP8 subfamily.
    
0.997
LOC106590004
AT-rich interactive domain-containing protein 4B-like.
   
 0.994
LOC106578775
AT-rich interactive domain-containing protein 4B-like isoform X1.
   
 0.994
arid4a
AT-rich interactive domain-containing protein 4A.
   
 0.994
LOC106611238
AT-rich interactive domain-containing protein 4A-like isoform X4.
   
 0.994
ENSSSAP00000103251
AT-rich interactive domain-containing protein 4B-like.
   
 0.994
dmap1
DNA methyltransferase 1-associated protein 1 isoform X2.
   
 0.993
ruvbl2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.992
trrap
Transformation/transcription domain-associated protein isoform X8; Belongs to the PI3/PI4-kinase family.
    
 0.991
ruvb1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.990
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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