STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106605591Uncharacterized protein LOC106605591 isoform X1. (2352 aa)    
Predicted Functional Partners:
LOC106579786
Endonuclease domain-containing 1 protein-like.
  
  0.488
LOC106605405
Uncharacterized protein LOC106605405.
  
  0.483
LOC106571956
methyl-CpG-binding domain protein 6-like.
  
     0.470
LOC106561663
Uncharacterized protein LOC106561663 isoform X1.
  
 
   0.450
LOC106573063
Uncharacterized protein LOC106573063 isoform X1.
  
 
   0.446
LOC106566702
methyl-CpG-binding domain protein 5-like isoform X1.
  
     0.443
LOC106562960
Protein phosphatase 1 regulatory subunit 26-like.
  
  0.439
LOC106568827
Protein phosphatase 1 regulatory subunit 26-like isoform X1.
  
  0.437
LOC106576351
Golgin subfamily B member 1-like isoform X1.
  
 
  0.431
LOC106609404
Golgin subfamily B member 1-like isoform X3.
  
 
  0.431
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.