STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106611067Ankyrin repeat domain-containing protein 1-like. (309 aa)    
Predicted Functional Partners:
LOC106612176
Ankyrin repeat and SOCS box protein 12-like.
  
 
  0.571
LOC106612176-2
Ankyrin repeat and SOCS box protein 12-like.
  
 
  0.571
ift52
Intraflagellar transport protein 52 homolog.
    
 0.561
ift57
Intraflagellar transport protein 57 homolog isoform X1.
    
 0.548
ift80
LOW QUALITY PROTEIN: intraflagellar transport protein 80 homolog.
    
 0.547
dysi1
Dysferlin-interacting protein 1.
  
 
  0.543
ift172
Intraflagellar transport protein 172 homolog.
    
 0.543
LOC106585468
Intraflagellar transport protein 81 homolog.
    
 0.536
ENSSSAP00000109669
annotation not available
    
 0.536
ENSSSAP00000030481
annotation not available
  
   
 0.532
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.