STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000005859annotation not available (69 aa)    
Predicted Functional Partners:
LOC106564479
Structural maintenance of chromosomes protein.
   
 0.921
ENSSSAP00000026070
Structural maintenance of chromosomes 3.
   
 0.921
LOC106572714
Structural maintenance of chromosomes protein.
   
 0.917
LOC106561601
Structural maintenance of chromosomes protein.
   
 0.917
LOC106567029
Structural maintenance of chromosomes protein.
   
 0.917
LOC106563851
Sister chromatid cohesion protein PDS5 homolog B-like.
   
 0.892
LOC106592481
Sister chromatid cohesion protein PDS5 homolog A-like.
   
 0.892
ENSSSAP00000054905
annotation not available
   
 0.892
LOC106563887
Nipped-B protein.
   
 0.889
LOC106585921
Nipped-B protein.
   
 0.889
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.