STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106607888DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)    
Predicted Functional Partners:
brca2
Breast cancer type 2 susceptibility protein isoform X5.
   
 0.999
exo1
Exonuclease 1.
  
 0.996
wrn
Werner syndrome ATP-dependent helicase isoform X2.
  
 0.995
ENSSSAP00000042990
annotation not available
   
 0.994
xrcc3
DNA repair protein XRCC3.
  
 
0.993
brca1
Breast cancer type 1 susceptibility protein isoform X2.
   
 0.992
rad52
DNA repair protein RAD52 homolog.
    
 0.992
dmc1
Meiotic recombination protein DMC1/LIM15 homolog isoform X2; Belongs to the RecA family.
  
0.989
blm
Bloom syndrome protein isoform X1.
  
 0.989
recql4
ATP-dependent DNA helicase Q4.
  
 0.988
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.