STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106593600poly(A)-specific ribonuclease PARN-like. (753 aa)    
Predicted Functional Partners:
dcp2
m7GpppN-mRNA hydrolase isoform X1.
     
 0.877
exosc5
Exosome complex component RRP46 isoform X1.
     
 0.803
dis3l2
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily.
   
 
 0.793
exosc6
Exosome complex exonuclease MTR3.
     
 0.792
LOC106599575
5'-3' exoribonuclease 1.
      
 0.789
exosc3
Exosome complex component RRP40.
     
 0.783
exos4
Exosome complex exonuclease RRP41.
     
 0.780
exosc7
Exosome complex exonuclease RRP42.
     
 0.767
dis3
Exosome complex exonuclease RRP44 isoform X1; Belongs to the RNR ribonuclease family.
   
 
 0.766
LOC106580468
Microprocessor complex subunit DGCR8-like.
   
  
 0.738
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.