STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spicTranscription factor Spi-C. (236 aa)    
Predicted Functional Partners:
ENSSSAP00000093136
Nipsnap homolog 3A (C. elegans).
      
 0.552
mpeg1
Macrophage-expressed gene 1 protein.
   
  
 0.460
LOC106563690
Cytokine receptor common subunit gamma-like.
   
    0.448
tshb
Thyrotropin subunit beta; Indispensable for the control of thyroid structure and metabolism. May play some role in the biological processes of the immature fishes.
      
 0.444
LOC106575321
Hemopexin; Binds heme and transports it to the liver for breakdown and iron recovery, after which the free hemopexin returns to the circulation.
      
 0.424
ENSSSAP00000078996
annotation not available
      
 0.424
LOC106572533
Gametocyte-specific factor 1-like isoform X1.
      
 0.418
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.