STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106611018Transmembrane protein 87A-like isoform X1. (645 aa)    
Predicted Functional Partners:
LOC106610392
AP-4 complex accessory subunit tepsin-like.
      
 0.440
acoxl
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
      
 0.434
dus3l
tRNA-dihydrouridine(47) synthase [NAD(P)(+)].
      
 0.433
gpaa1
Glycosylphosphatidylinositol anchor attachment 1 protein.
      
 0.428
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.