STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000005894Spi-2 proto-oncogene. (240 aa)    
Predicted Functional Partners:
LOC106603082
Spermine synthase-like.
      
 0.599
LOC106587315
Gliomedin-like isoform X3.
      
 0.555
tcp1
T-complex protein 1 subunit alpha.
      
 0.543
mpeg1
Macrophage-expressed gene 1 protein.
   
  
 0.510
LOC106563690
Cytokine receptor common subunit gamma-like.
   
    0.448
mprd
Cation-dependent mannose-6-phosphate receptor precursor.
      
 0.428
LOC106576801
Cation-dependent mannose-6-phosphate receptor-like.
      
 0.428
LOC106612885
Olfactory marker protein-like.
      
 0.414
LOC106581015
Olfactory marker protein-like.
      
 0.414
spr
Sepiapterin reductase.
      
 0.402
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.