STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000005895annotation not available (121 aa)    
Predicted Functional Partners:
LOC106600427
Niemann-Pick C1 protein-like.
   
 0.965
ENSSSAP00000051691
Niemann-Pick C1 protein-like.
   
 0.965
LOC106569313
Niemann-Pick C1 protein-like.
   
 0.965
NPC1L1
Niemann-Pick C1-like protein 1.
   
 0.965
LOC106605338
Sterol regulatory element-binding protein cleavage-activating protein-like isoform X1.
   
 0.912
SCAP
Sterol regulatory element-binding protein cleavage-activating protein-like isoform X4.
   
 0.912
LOC106611125
Apolipoprotein B-100-like.
     
 0.753
LOC100136579
Apolipoprotein B-100 isoform X1.
     
 0.753
LOC106568756
Uncharacterized protein LOC106568756 isoform X2.
     
 0.684
LOC106600070
Vitellogenin-like.
     
 0.680
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.