STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cd68Macrosialin precursor. (355 aa)    
Predicted Functional Partners:
LOC106577768
TYRO protein tyrosine kinase-binding protein-like.
   
  
 0.670
LOC106605663
TYRO protein tyrosine kinase-binding protein-like.
   
  
 0.670
depdc5
DEP domain-containing protein 5 isoform X4.
    
 
 0.655
tusc4
Tumor suppressor candidate 4.
    
 
 0.648
nprl2
Nitrogen permease regulator 2-like protein isoform X1.
    
 
 0.648
ptprc
Receptor-type tyrosine-protein phosphatase C isoform X1.
   
  
 0.647
kptn
Kaptin.
    
 
 0.645
LOC106588110
Regulatory-associated protein of mTOR isoform X2.
    
 
 0.639
LOC106564921
Regulatory-associated protein of mTOR-like isoform X3.
    
 
 0.639
spd2b
SH3 and PX domain-containing protein 2B isoform X3.
   
  
 0.621
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.