STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106613767BTB/POZ domain-containing protein 2-like isoform X1. (589 aa)    
Predicted Functional Partners:
cops3
COP9 signalosome complex subunit 3.
    
 0.702
cops3-2
COP9 constitutive photomorphogenic homolog subunit 3.
    
 0.702
LOC106612448
Cullin-3-like.
   
 0.684
LOC106600593
Cullin-3-like; Belongs to the cullin family.
   
 0.684
CUL3
Cullin-3-like; Belongs to the cullin family.
   
 0.684
LOC106580681
Cullin-3; Belongs to the cullin family.
   
 0.684
LOC106579522
COP9 constitutive photomorphogenic homolog subunit 5.
    
  0.676
cops5
COP9 signalosome complex subunit 5.
    
  0.676
csn6
COP9 signalosome complex subunit 6.
    
  0.625
COPS6
COP9 signalosome complex subunit 6.
    
  0.625
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.