STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608532Transforming protein p54/c-ets-1-like. (126 aa)    
Predicted Functional Partners:
ENSSSAP00000041695
annotation not available
  
 
 0.608
LOC106592754
Paired box protein Pax-5-like.
  
 
 0.605
PAX2
Paired box 2.
  
 
 0.596
ENSSSAP00000113117
annotation not available
  
  
  0.503
LOC106577321
Paired box protein Pax-2-B-like isoform X6.
  
 
 0.485
ENSSSAP00000027669
Aryl hydrocarbon receptor nuclear translocator.
  
  
  0.460
ENSSSAP00000012834
annotation not available
  
  
 0.453
ENSSSAP00000022362
annotation not available
  
  
 0.453
ENSSSAP00000038537
annotation not available
  
  
 0.453
SMAD1
Mothers against decapentaplegic homolog 1-like.
  
 
 
 0.453
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.