LOC106595045 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC106595045

B-cell antigen receptor complex-associated protein alpha chain-like isoform X1. (234 aa)

Predicted Functional Partners:

cd79b

0.999

LOC106605635

0.830

LOC106606764

0.796

ENSSSAP00000008346

0.796

ENSSSAP00000008353

0.796

ENSSSAP00000028814

0.796

ENSSSAP00000048490

0.796

ENSSSAP00000076865

0.796

blnk

0.792

ENSSSAP00000036432

0.757

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000008346	LOC106595045	ENSSSAP00000008346	ENSSSAP00000006009	annotation not available	B-cell antigen receptor complex-associated protein alpha chain-like isoform X1.	0.796
ENSSSAP00000008346	cd79b	ENSSSAP00000008346	ENSSSAP00000070155	annotation not available	B-cell antigen receptor complex-associated protein beta chain isoform X2.	0.942
ENSSSAP00000008353	LOC106595045	ENSSSAP00000008353	ENSSSAP00000006009	annotation not available	B-cell antigen receptor complex-associated protein alpha chain-like isoform X1.	0.796
ENSSSAP00000008353	cd79b	ENSSSAP00000008353	ENSSSAP00000070155	annotation not available	B-cell antigen receptor complex-associated protein beta chain isoform X2.	0.942
ENSSSAP00000028814	LOC106595045	ENSSSAP00000028814	ENSSSAP00000006009	annotation not available	B-cell antigen receptor complex-associated protein alpha chain-like isoform X1.	0.796
ENSSSAP00000028814	cd79b	ENSSSAP00000028814	ENSSSAP00000070155	annotation not available	B-cell antigen receptor complex-associated protein beta chain isoform X2.	0.942
ENSSSAP00000036432	LOC106595045	ENSSSAP00000036432	ENSSSAP00000006009	annotation not available	B-cell antigen receptor complex-associated protein alpha chain-like isoform X1.	0.757
ENSSSAP00000036432	cd79b	ENSSSAP00000036432	ENSSSAP00000070155	annotation not available	B-cell antigen receptor complex-associated protein beta chain isoform X2.	0.914
ENSSSAP00000048490	LOC106595045	ENSSSAP00000048490	ENSSSAP00000006009	annotation not available	B-cell antigen receptor complex-associated protein alpha chain-like isoform X1.	0.796
ENSSSAP00000048490	cd79b	ENSSSAP00000048490	ENSSSAP00000070155	annotation not available	B-cell antigen receptor complex-associated protein beta chain isoform X2.	0.942
ENSSSAP00000076865	LOC106595045	ENSSSAP00000076865	ENSSSAP00000006009	annotation not available	B-cell antigen receptor complex-associated protein alpha chain-like isoform X1.	0.796
ENSSSAP00000076865	cd79b	ENSSSAP00000076865	ENSSSAP00000070155	annotation not available	B-cell antigen receptor complex-associated protein beta chain isoform X2.	0.942
LOC106595045	ENSSSAP00000008346	ENSSSAP00000006009	ENSSSAP00000008346	B-cell antigen receptor complex-associated protein alpha chain-like isoform X1.	annotation not available	0.796
LOC106595045	ENSSSAP00000008353	ENSSSAP00000006009	ENSSSAP00000008353	B-cell antigen receptor complex-associated protein alpha chain-like isoform X1.	annotation not available	0.796
LOC106595045	ENSSSAP00000028814	ENSSSAP00000006009	ENSSSAP00000028814	B-cell antigen receptor complex-associated protein alpha chain-like isoform X1.	annotation not available	0.796
LOC106595045	ENSSSAP00000036432	ENSSSAP00000006009	ENSSSAP00000036432	B-cell antigen receptor complex-associated protein alpha chain-like isoform X1.	annotation not available	0.757
LOC106595045	ENSSSAP00000048490	ENSSSAP00000006009	ENSSSAP00000048490	B-cell antigen receptor complex-associated protein alpha chain-like isoform X1.	annotation not available	0.796
LOC106595045	ENSSSAP00000076865	ENSSSAP00000006009	ENSSSAP00000076865	B-cell antigen receptor complex-associated protein alpha chain-like isoform X1.	annotation not available	0.796
LOC106595045	LOC106605635	ENSSSAP00000006009	ENSSSAP00000055881	B-cell antigen receptor complex-associated protein alpha chain-like isoform X1.	B-cell receptor CD22-like isoform X1.	0.830
LOC106595045	LOC106606764	ENSSSAP00000006009	ENSSSAP00000008321	B-cell antigen receptor complex-associated protein alpha chain-like isoform X1.	Uncharacterized protein LOC106606764.	0.796