STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adad1Adenosine deaminase domain-containing protein 1 isoform X1. (569 aa)    
Predicted Functional Partners:
NUDT6
Nucleoside diphosphate-linked moiety X motif 6-like isoform X2; Belongs to the Nudix hydrolase family.
      
 0.713
nudt6
Nucleoside diphosphate-linked moiety X motif 6.
      
 0.713
LOC106611615
AP-1 complex-associated regulatory protein-like isoform X2.
      
 0.703
LOC106604579
AP-1 complex-associated regulatory protein-like.
      
 0.703
LOC106612201
Centrin-1-like isoform X2.
      
 0.696
LOC106604249
Caltractin-like.
      
 0.696
ankrd50
Ankyrin repeat domain-containing protein 50.
      
 0.686
LOC106604585
Bardet-Biedl syndrome 12 protein-like.
      
 0.681
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
      
 0.658
SPATA5
Spermatogenesis-associated protein 5 isoform X2.
      
 0.613
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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