STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100380859Anion exchange protein. (919 aa)    
Predicted Functional Partners:
rn151
RING finger protein 151-like isoform X1.
   
 
 0.645
LOC100194705
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily.
   
  
 0.631
LOC106571448
Sodium-dependent multivitamin transporter-like; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.627
LOC106607858
Sodium-dependent multivitamin transporter-like isoform X2; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.627
F13A1
Coagulation factor XIII A chain-like.
   
 
 0.600
rhbg
Ammonium transporter Rh type B isoform X1; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
   
 
 0.574
alas2
5-aminolevulinate synthase.
   
  
 0.562
cahz
Carbonic anhydrase; Belongs to the alpha-carbonic anhydrase family.
   
 
 0.541
f13a
Coagulation factor XIII A chain.
   
 
 0.535
F13A1-2
Coagulation factor XIII A chain-like.
   
 
 0.535
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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