STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCZZeta-sarcoglycan. (304 aa)    
Predicted Functional Partners:
sspn
Sarcospan.
   
 0.712
LOC106589634
Alpha-sarcoglycan-like isoform X2.
   
 0.701
sgce
Epsilon-sarcoglycan isoform X2.
   
 0.655
sgce-2
Epsilon-sarcoglycan isoform X1.
   
 0.655
LOC106566673
Dystroglycan-like.
    
 0.602
LOC106571846
Dystroglycan-like.
    
 0.602
LOC106565061
Dystroglycan-like.
    
 0.602
dag1
Dystroglycan.
    
 0.602
SGCG
Gamma-sarcoglycan-like.
  
 
0.580
LOC106581116
Gamma-sarcoglycan-like.
  
 
0.574
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.