STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608544Protocadherin-7-like isoform X1. (1256 aa)    
Predicted Functional Partners:
LOC106563044
Lipoma HMGIC fusion partner-like 2 protein.
    
  0.471
lhfpl2
Lipoma HMGIC fusion partner-like 2 protein.
    
  0.471
galm
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
      
 0.445
LOC106560912
Actin-binding protein anillin-like isoform X5.
    
  0.439
ANLN
Actin-binding protein anillin-like isoform X1.
    
  0.439
peca1
Platelet endothelial cell adhesion molecule isoform X1.
    
  0.430
LOC106588103
Platelet endothelial cell adhesion molecule-like.
    
  0.430
ENSSSAP00000006163
annotation not available
    
 0.424
LOC106600820
Junction plakoglobin-like isoform X1.
    
 0.424
LOC106564751
Junction plakoglobin-like.
    
 0.424
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.