STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCKARCholecystokinin receptor type A-like; Belongs to the G-protein coupled receptor 1 family. (461 aa)    
Predicted Functional Partners:
cck-l
cholecystokinin-L isoform X1.
   
 0.984
cck-n
cholecystokinin-N precursor.
   
 0.984
LOC106564758
Cholecystokinin-like.
     
  0.900
LOC106588527
Cholecystokinin-like isoform X1.
     
  0.900
LOC106580086
Guanine nucleotide-binding protein G(Q) subunit alpha-like.
    
 0.876
LOC106580085
Guanine nucleotide-binding protein subunit alpha-14-like.
    
 0.876
GNA14
Guanine nucleotide-binding protein subunit alpha-14-like.
    
 0.876
LOC106562028
Guanine nucleotide-binding protein G(Q) subunit alpha-like isoform X1.
    
 0.870
LOC106568348
Guanine nucleotide-binding protein G(Q) subunit alpha-like.
    
 0.870
LOC106570651
Cholecystokinin-like.
   
 0.853
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.