STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106602191Myotubularin-related protein 7-like isoform X1. (649 aa)    
Predicted Functional Partners:
FIG4
Polyphosphoinositide phosphatase.
   
 
 0.937
ENSSSAP00000072939
Zgc:154055.
  
0.914
LOC106578739
Myotubularin-related protein 9-like isoform X1.
  
0.912
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.907
LOC106570214
1-phosphatidylinositol phosphodiesterase-like isoform X1.
     
  0.900
LOC106608867
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.761
LOC106577844
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.761
LOC106570660
Phosphatidylinositide phosphatase SAC1-B.
     
 0.752
LOC106579366
Phosphatidylinositide phosphatase SAC1-A.
     
 0.752
LOC106586374
1-phosphatidylinositol 3-phosphate 5-kinase-like isoform X7.
     
 0.745
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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