STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601910Uncharacterized protein LOC106601910 isoform X1. (140 aa)    
Predicted Functional Partners:
supt7l
STAGA complex 65 subunit gamma.
      
 0.587
mto1
Protein MTO1 homolog, mitochondrial.
      
 0.536
LOC106569430
Transitional endoplasmic reticulum ATPase-like; Belongs to the AAA ATPase family.
    
   0.516
LOC106564263
Transitional endoplasmic reticulum ATPase-like; Belongs to the AAA ATPase family.
    
   0.516
LOC106562928
Transitional endoplasmic reticulum ATPase-like.
    
   0.516
LOC106580289
Transitional endoplasmic reticulum ATPase-like; Belongs to the AAA ATPase family.
    
   0.516
LOC106585012
Transitional endoplasmic reticulum ATPase-like; Belongs to the AAA ATPase family.
    
   0.516
LOC106572118
NSFL1 cofactor p47-like isoform X2.
    
   0.511
LOC106566439
NSFL1 cofactor p47-like isoform X1.
    
   0.511
LOC106575761
CCR4-NOT transcription complex subunit 10-like isoform X6.
      
 0.430
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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