STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106607496Nuclear receptor subfamily 1 group D member 1-like. (607 aa)    
Predicted Functional Partners:
LOC106603505
Nuclear receptor corepressor 1-like isoform X7.
    
 0.866
ENSSSAP00000020891
Nuclear receptor corepressor 2.
    
 0.866
ncor1
Nuclear receptor corepressor 1 isoform X8.
    
 0.866
LOC106585520
Nuclear receptor corepressor 2-like.
    
 0.866
GPS2
G protein pathway suppressor 2.
    
 0.759
selja
Selenoprotein Ja.
    
 0.759
crj1a
Crystallin J1A isoform X1.
    
 0.759
GPS2-2
G protein pathway suppressor 2-like.
    
 0.759
LOC106561607
C-Jun-amino-terminal kinase-interacting protein 1-like.
      
 0.702
LOC106568206
Cryptochrome-1-like isoform X1.
      
 0.634
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.