STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106561364Krueppel-like factor 4 isoform X1. (438 aa)    
Predicted Functional Partners:
lmo2
Rhombotin-2.
    
 
 0.600
fkh
Fork head domain protein isoform X1.
    
 0.578
FOXJ3
Forkhead box protein J3-like.
    
 0.537
LOC100194495
Early growth response protein 2b.
   
 
0.536
gmeb2
Glucocorticoid modulatory element-binding protein 2 isoform X1.
    
 
 0.501
CEBPB
CCAAT/enhancer-binding protein.
    
 0.496
FSTL1
Follistatin-related protein 1.
      
 0.489
LOC106567323
POU domain protein.
    
 0.485
LOC106563125
POU domain protein.
    
 0.485
LOC106584342
Transcription factor Sox-2-like.
   
 0.445
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.