STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609407Phospholipase B-like; Putative phospholipase. (597 aa)    
Predicted Functional Partners:
LOC106599096
Phospholipase A2.
     
 0.668
LOC106560559
Phospholipase A2.
     
 0.668
LOC106583972
Phospholipase A2.
     
 0.668
LOC106612570
A-kinase anchor protein SPHKAP-like isoform X2.
      
 0.431
SPHKAP
A-kinase anchor protein SPHKAP-like isoform X3.
      
 0.431
n6amt1
hemK methyltransferase family member 2 isoform X1.
      
 0.418
jmjd7
Cytosolic phospholipase A2 beta.
     
 0.405
pla2g4f
Phospholipase A2.
     
 0.405
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.