STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mprdCation-dependent mannose-6-phosphate receptor precursor. (280 aa)    
Predicted Functional Partners:
LOC106571395
Cation-independent mannose-6-phosphate receptor-like isoform X1.
     
 0.984
LOC106607799
Cation-independent mannose-6-phosphate receptor-like.
     
 0.984
LOC106576801
Cation-dependent mannose-6-phosphate receptor-like.
  
  
0.903
LOC106579024
Vesicle transport through interaction with t-SNAREs homolog 1A-like isoform X1.
   
 
 0.785
LOC106589328
Vesicle transport through interaction with t-SNAREs homolog 1A-like isoform X4.
   
 
 0.785
ENSSSAP00000003185
Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.
    
 
 0.777
LOC106601804
ADP-ribosylation factor-binding protein GGA3-like.
    
 
 0.777
LOC106587115
ADP-ribosylation factor-binding protein GGA3-like.
    
 
 0.777
LOC106606568
ADP-ribosylation factor-binding protein GGA3-like.
    
 
 0.777
ENSSSAP00000042969
annotation not available
    
 
 0.777
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.