STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mvpMajor vault protein. (873 aa)    
Predicted Functional Partners:
tep1
Telomerase protein component 1.
    
 
 0.934
LOC106582088
Poly [ADP-ribose] polymerase.
    
 
 0.858
LOC106567065
Retinoic acid receptor gamma-A isoform X5.
    
 
 0.846
DNA2
DNA replication ATP-dependent helicase/nuclease DNA2.
      
 0.716
LOC106607900
28S ribosomal protein S18a, mitochondrial-like.
      
 0.677
SLC35B1
Solute carrier family 35 member B1.
      
 0.664
LOC106564751
Junction plakoglobin-like.
      
 0.633
plak
Junction plakoglobin isoform X1.
      
 0.633
myd88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
  
 0.629
lsr
Lipolysis-stimulated lipoprotein receptor isoform X1.
      
 0.616
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.