STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106596191Homeobox protein HMX3-B-like. (262 aa)    
Predicted Functional Partners:
LOC106566276
LOW QUALITY PROTEIN: pre-mRNA-splicing factor ISY1 homolog.
    
   0.608
LOC106611138
Protein phosphatase 1 regulatory subunit 21-like.
    
   0.515
ppp1r21
Protein phosphatase 1 regulatory subunit 21.
    
   0.515
ENSSSAP00000031733
annotation not available
    
   0.474
hinfp
Histone H4 transcription factor.
    
   0.474
LOC106581133
Histone H4 transcription factor-like.
    
   0.474
LOC106613002
Histone H4 transcription factor-like isoform X3.
    
   0.474
LOC106603664
Dystrobrevin.
   
   0.421
ENSSSAP00000052591
annotation not available
   
   0.421
LOC106611333
Dystrobrevin beta-like isoform X2.
   
   0.421
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.