STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRAG1Tyrosine-protein kinase SgK223-like. (1361 aa)    
Predicted Functional Partners:
LOC106611341
Intersectin-2-like.
     
 0.760
ENSSSAP00000067020
Intersectin 2b.
     
 0.760
trrap
Transformation/transcription domain-associated protein isoform X8; Belongs to the PI3/PI4-kinase family.
      
 0.597
FAM20A
Protein FAM20A-like.
      
 0.593
fam20a
Pseudokinase FAM20A isoform X1.
      
 0.593
LOC100286499
Intersectin-1 isoform X5.
     
 0.552
LOC106574310
Intersectin-1-like isoform X8.
     
 0.552
LOC106583318
Cell surface glycoprotein 1-like isoform X1.
     
 0.552
clspn
Claspin isoform X3.
  
     0.429
CLSPN
Claspin-like isoform X1.
  
     0.421
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.