STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000006558annotation not available (209 aa)    
Predicted Functional Partners:
ENSSSAP00000042990
annotation not available
    
 
 0.979
xrcc3
DNA repair protein XRCC3.
  
 
 0.937
SKP1
S-phase kinase associated protein 1.
    
 
 0.925
SKP1-2
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 
 0.925
rad52
DNA repair protein RAD52 homolog.
    
 
 0.898
wrn
Werner syndrome ATP-dependent helicase isoform X2.
  
 
 0.887
mus81
Crossover junction endonuclease MUS81.
    
 
 0.849
ENSSSAP00000025751
annotation not available
  
 
 0.845
recql4
ATP-dependent DNA helicase Q4.
  
 
 0.838
blm
Bloom syndrome protein isoform X1.
  
 
 0.838
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.