STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10660941428 kDa heat- and acid-stable phosphoprotein-like isoform X1. (161 aa)    
Predicted Functional Partners:
rpp40
Ribonuclease P protein subunit p40.
      
 0.596
pfdn6
Prefoldin subunit 6.
   
  
 0.573
rcn2
Reticulocalbin-2.
      
 0.565
ENSSSAP00000008493
annotation not available
    
 
 0.508
LOC106606462
Platelet-derived growth factor subunit A-like isoform X1; Belongs to the PDGF/VEGF growth factor family.
    
 
 0.508
LOC106592237
Uncharacterized protein C8orf88-like isoform X2.
      
 0.508
rabggtb
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
      
 0.468
serf2
Small EDRK-rich factor 2 isoform X1.
      
 0.468
serf2-2
Small EDRK-rich factor 2 isoform X2.
      
 0.468
LOC106561178
Small EDRK-rich factor 2-like.
      
 0.468
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.