STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106611384Synaptosomal-associated protein; Belongs to the SNAP-25 family. (209 aa)    
Predicted Functional Partners:
vamp3
Vesicle-associated membrane protein 3.
   
 0.995
ENSSSAP00000044139
Zgc:92912.
   
 0.959
ENSSSAP00000070508
Vesicle-associated membrane protein 2.
   
 0.959
ENSSSAP00000084506
Vesicle-associated membrane protein 2-like.
   
 0.959
LOC106570163
Vesicle-associated membrane protein 2-like.
   
 0.959
LOC106574196
Vesicle-associated membrane protein 1-like.
   
 0.959
LOC106603197
Vesicle-associated membrane protein 2.
   
 0.959
stx1b
Salmo salar syntaxin 1B (stx1b), mRNA.
   
 0.927
LOC106600813
Syntaxin-1B; Belongs to the syntaxin family.
   
 0.927
LOC106609899
Syntaxin-3-like.
   
 0.926
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.