LOC106610412 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC106610412

alpha-2C adrenergic receptor-like; Belongs to the G-protein coupled receptor 1 family. (793 aa)

Predicted Functional Partners:

GNG2

0.615

gbg2

0.615

gng4

0.615

LOC106563207

0.583

LOC106568432

0.565

gng10

0.565

ENSSSAP00000028987

0.551

LOC106561786

0.551

LOC106562494

0.551

ENSSSAP00000111420

0.551

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000028987	GNG2	ENSSSAP00000028987	ENSSSAP00000062889	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.853
ENSSSAP00000028987	LOC106562494	ENSSSAP00000028987	ENSSSAP00000030725	annotation not available	Guanine nucleotide-binding protein subunit beta-5-like isoform X1.	0.471
ENSSSAP00000028987	LOC106563207	ENSSSAP00000028987	ENSSSAP00000041971	annotation not available	Guanine nucleotide-binding protein G(Z) subunit alpha.	0.840
ENSSSAP00000028987	LOC106568432	ENSSSAP00000028987	ENSSSAP00000049675	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.878
ENSSSAP00000028987	LOC106610412	ENSSSAP00000028987	ENSSSAP00000006587	annotation not available	alpha-2C adrenergic receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.551
ENSSSAP00000028987	gbg2	ENSSSAP00000028987	ENSSSAP00000098345	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.853
ENSSSAP00000028987	gng10	ENSSSAP00000028987	ENSSSAP00000093628	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.850
ENSSSAP00000028987	gng4	ENSSSAP00000028987	ENSSSAP00000103279	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.853
ENSSSAP00000111420	GNG2	ENSSSAP00000111420	ENSSSAP00000062889	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.853
ENSSSAP00000111420	LOC106563207	ENSSSAP00000111420	ENSSSAP00000041971	annotation not available	Guanine nucleotide-binding protein G(Z) subunit alpha.	0.840
ENSSSAP00000111420	LOC106568432	ENSSSAP00000111420	ENSSSAP00000049675	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.878
ENSSSAP00000111420	LOC106610412	ENSSSAP00000111420	ENSSSAP00000006587	annotation not available	alpha-2C adrenergic receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.551
ENSSSAP00000111420	gbg2	ENSSSAP00000111420	ENSSSAP00000098345	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.853
ENSSSAP00000111420	gng10	ENSSSAP00000111420	ENSSSAP00000093628	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.850
ENSSSAP00000111420	gng4	ENSSSAP00000111420	ENSSSAP00000103279	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.853
GNG2	ENSSSAP00000028987	ENSSSAP00000062889	ENSSSAP00000028987	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	annotation not available	0.853
GNG2	ENSSSAP00000111420	ENSSSAP00000062889	ENSSSAP00000111420	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	annotation not available	0.853
GNG2	LOC106561786	ENSSSAP00000062889	ENSSSAP00000029573	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Guanine nucleotide-binding protein subunit beta-5-like.	0.853
GNG2	LOC106562494	ENSSSAP00000062889	ENSSSAP00000030725	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Guanine nucleotide-binding protein subunit beta-5-like isoform X1.	0.853
GNG2	LOC106563207	ENSSSAP00000062889	ENSSSAP00000041971	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Guanine nucleotide-binding protein G(Z) subunit alpha.	0.849